Application
Protein Structural Analysis
Studying atomic structures of proteins is crucially important to understand and control their functions and to develop new drugs. We have developed a method to estimate chemical and physical quantities of proteins by applying TDA to the structural data obtained from PDB (Protein Data Bank).
literatureM. Gameiro, Y. Hiraoka, S. Izumi, M. Kramar, K. Mischaikow, and V. Nanda, TopologicalMeasurement of Protein Compressibility via Persistent Diagrams, Japan J. Indust. Appl.Math., Vol. 32 (2015), 1-17.